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To download and compile the tools, perform the following steps:

  1. Download the source code tarball
  2. Unpack the tarball using the command 'tar xzvf greatTools.tar.gz'
  3. Follow the instructions given in the README.txt file


All of the data included in the GREAT ontologies is publicly available, and we provide links or references for every ontology. We do not offer these data for download, as all data is available from the original sources. Additionally, the GREAT web tool offers numerous "Export" functions to save all ontology data as it pertains to your sets.

GREAT Gene Sets

Please refer to Genes for instructions on how to download the gene set used by GREAT.