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# What do the output columns mean?

## General

- ID: Term identifier from the ontology

- Rank: ordinal rank of the p-value compared to the p-values of other annotations
- Raw P-value: uncorrected P-value from the hypergeometric test
- Bonferroni P-Value: Bonferroni corrected P-value
- FDR Q-Value: False discovery rate Q-value
- Fold Enrichment (nk/NK): fold enrichment of number of genes in the test set with the annotation (observed / expected)
- Expected (n/NK): expected number of genes in the test set with the annotation
- Observed (k): actual number of genes in the test set with the annotation
- Total Genes (K): number of genes in the genome with the annotation
- Term Coverage (k/K): fraction of all genes with the annotation that are tagged by the test set

- Rank: ordinal rank of the p-value compared to the p-values of other annotations
- Raw P-value: uncorrected P-value from the binomial test
- Bonferroni P-Value: Bonferroni corrected P-value
- FDR Q-Value: False discovery rate Q-value
- Fold Enrichment (nk/NK): fold enrichment of number of genomic regions in the test set with the annotation (observed / expected)
- Expected (np): expected number of genomic regions in the test set with the annotation
- Hits (k): actual number of genomic regions in the test set with the annotation
- Genome Fraction (p): fraction of bases in the genome that lie in the domain of attraction of a gene with the annotation