Overview Demo Video How to Cite Download Help Forum Bejerano Lab, Stanford University
version 1.8.2		Genomic Regions Enrichment of Annotations Tool (v1.8.2) GREAT version 4.0.4     current (08/19/2019 to now) GREAT version 3.0.0     reproduce results from 2/15/2015 to 08/18/2019) GREAT version 2.0.2     reproduce results from 4/03/2012 to 02/14/2015) GREAT version 1.8.2     reproduce results from 11/19/2010 to 04/02/2012) GREAT version 1.2.6     reproduce results from 05/20/2010 to 11/18/2010

Choose one of the data sets below to run: a corresponding output page will appear, as if you had provided the data set and all parameters yourself. In each case, the data set is run against a whole genome background, using the basal plus extension genomic association rule with its default values.

Set	Experiment	Set   size	Species	Cell/tissue type	Reference	GREAT Enrichment Highlights
SRF (activator)	ChIP-seq	556	Human	Jurkat	Valouev et al. 2008	Actin-related terms
NRSF/REST (repressor)	ChIP-seq	1,712	Human	Jurkat	Valouev et al. 2008	Neurotransmitters and ion channels
p300 transcriptional co-activator	ChIP-seq	2,105	Mouse	Embryonic limb E11.5	Visel et al. 2009	Embryonic limb development
Ultraconserved elements	Comparative genomics	481	Human	N/A	Bejerano et al. 2004	Transcription regulation and developmental defects
Height-associated unlinked SNPs	GWAS	235	Human	N/A	NHGRI compendium	Bone growth terms
CNEs with H3K4me1 & me3	Comparative genomics and ChIP-seq	491	Zebrafish	Embryos 24hpf	Aday et al. 2011	Transcription regulation and development
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